There may be a slight SEO advantage in picking up the old Netsuite domain URLs and redirecting them to their equivalent on your new site. Assuming you have the functionality in your account still, you can do this with Setup > Sitebuilder > Redirects. I'd pick up as many as possible, leave things to settle for a month or two, then add a robots.txt file in your Website Hosting Files > Live Hosting Files (or equivalent) to block all further indexing, ie.